Published online before print April 15, 2011,
doi: 10.1073/pnas.1102454108
PNAS  May 10, 2011   vol. 108  no. 19  7950-7955
 http://www.pnas.org/content/108/19/7950.abstract?etoc

"Normal and neoplastic non-stem cells can spontaneously convert to a stem-like state".

Christine L. Chaffer a, b,  Ines Brueckmann  a,  Christina Scheel  a, b,  Alicia J. Kaestli  a,  Paul A. Wiggins  a,  Leonardo O. Rodrigues  a, b,  Mary Brooks  a, b,  Ferenc Reinhardt  a, b,  Ying Su  c,  Korrnelia Polyak  c,  Lisa M. Arendt  d, e, Charlotte Kuperwasser  d, e,  Brian Bierie  a, b,  and   Robert A. Weinberg  a, b, f, 1

    a Whitehead Institute for Biomedical Research, Cambridge, MA 02142;
    b Ludwig MIT Center for Molecular Oncology, Cambridge, MA 02139;
    c Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02115;
    d Department of Anatomy and Cellular Biology, Sackler School, Tufts University School of Medicine, Boston,     MA 02111;
    e Molecular Oncology Research Institute, Tufts Medical Center, Boston, MA 02111;
     f Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139

Contributed by Robert A. Weinberg, March 2, 2011 (sent for review December 8, 2010).




Abstract:

Current models of stem cell biology assume that normal and neoplastic stem cells reside at the apices of hierarchies and differentiate into non-stem progeny in a uni-directional manner. Here we identify a sub-population of basal-like human mammary epithelial cells that departs from that assumption, spontaneously de-differentiating into stem-like cells. Moreover, oncogenic transformation enhances the spontaneous conversion, so that non-stem cancer cells give rise to cancer stem cell (CSC)-like cells in vitro and in vivo. We further show that the differentiation state of normal cells-of-origin is a strong determinant of post-transformation behavior. These findings demonstrate that normal and CSC-like cells can arise de novo from more differentiated cell types and that hierarchical models of mammary stem cell biology should encompass bi-directional inter-conversions between stem and non-stem compartments. The observed plasticity may allow derivation of patient-specific adult stem cells without genetic manipulation and holds important implications for therapeutic strategies to eradicate cancer.

    * breast cancer
    * de-differentiation

 1 To whom correspondence should be addressed. E-mail: weinberg@wi.mit.edu

Author contributions: C.L.C. and R.A.W. designed research; C.L.C., I.B., A.J.K., M.B., F.R., Y.S., L.M.A., and B.B. performed research; P.A.W. and L.O.R. contributed new analytic tools; C.L.C., C.S., P.A.W., L.O.R., K.P., and C.K. analyzed data; C.L.C. led the project; R.A.W. provided overall project guidance and scientific discussion; and C.L.C. and R.A.W. wrote the paper.

The authors declare no conflict of interest.

This article contains supporting information online at: http://www.pnas.org/lookup/suppl/doi:10.1073/pnas.1102454108/-/DCSupplemental

Introduction:

Tissue-specific stem cells exist in many adult tissues and can be
identified and isolated using specific antigen profiles. Their
potential utility in regenerative medicine holds great promise.
However, our current ability to isolate and propagate adult stem
cells for such purposes is limited (1). This limitation is due in
part to the paucity of stem cells in most epithelial tissues and our
fragmentary understanding of the survival, proliferation, and
differentiation signals that these cells receive in highly specialized
stem-cell niches (2, 3).

The discovery of stem-like cells in a number of human solid
tumor types has suggested a central role for stem cells in tumorigenesis.
Thus, stem-like cells, often termed cancer stem cells
(CSCs), have been defined experimentally by their ability to seed
new tumors and to spawn non-CSC populations lacking tumor-initiating
ability. CSC subpopulations have now been identified
in a variety of malignancies (4). Importantly, CSC-rich tumors
are associated with aggressive disease and poor prognosis (5),
indicating that an understanding of their biology is pertinent to
developing effective therapies.

Both normal and neoplastic stem cells are thought to be self-renewing
and to reside at the apex of a cellular hierarchy. Through
asymmetric division, these stem cells generate more differentiated
progeny that lack self-renewal capacity (6, 7). Intra-tumor heterogeneity
may thus derive from neoplastic cells at various differentiation
stages. In the case of human mammary epithelial cells
(HMECs), the structure of the associated stem-cell hierarchy is yet
to be definitively described. It is becoming apparent, however, that
the differentiation states of cells-of-origin can influence the organization
of derived neoplastic cell populations (8, 9).

These hypotheses have been difficult to validate because of
the apparent critical role of the stem-cell niche and associated
micro-environment in the survival and differentiation of both
normal and neoplastic stem cells. However, evidence of normal
and neoplastic cells with stem-cell properties residing naturally
among populations of epithelial cells propagated in culture has
been reported (10–12).

In light of the latter observations, we undertook to study the
biology of sub-populations of HMECs that exist in culture and
share certain properties with either stem-like cells or their more
differentiated derivatives. We identified an unexpected degree
of plasticity between stem-like and non-stem cell compartments,
leading to the demonstration that differentiated cell types can
convert to stem-like cells. Moreover, these observations hold
true for the neoplastic counterparts of such cells.

Results:

Enrichment of a Rare Floating Population of  Cells from Cultured Human Mammary Epithelial Cells.

In the work described below we
used primary HMECs as well as HMECs immortalized with
human telomerase (hTERT) that are termed here HME cells
(13, 14). We observed that populations of HME cells cultured
in their normal mammary epithelial growth medium contained
a small proportion of cells that grew as floating cells above the
majority population of adherent cells. These populations, termed
here HME–floating population of cells (HME-flopcs), were
collected from the conditioned media of HME cells through
centrifugation and introduced into new culture dishes, yielding
fully viable, adherent cell populations.

The epithelial nature of HME and HME-flopc cells was confirmed
by the expression of cytokeratins and low vimentin expression
(Fig. 1C) and by formation of acinar structures when
plated at clonal density on a layer of Matrigel (15). These polarized
epithelial structures contained cells expressing vimentin,
cytokeratins, and MUC1, the latter marking luminal epithelial
cells in the mammary gland (Fig. S1C). However, under two-dimensional
(2D) culture conditions, HME cells formed a typical
epithelial monolayer with junctional E-cadherin, b-catenin, and
ZO-1, whereas HME-flopc cells did not, despite similarly high
levels of those proteins (Fig. 1 B and C). Thus, HME-flopc cells
were stably morphologically distinct from the bulk HME cells.

Fig. 1. Enrichment of a rare population of floating cells from cultured mammary epithelial cells.

Fig. 1. Enrichment of a rare population of floating cells from cultured mammary epithelial cells.

(A) Schematic illustrating the derivation of HME- flopcs and single-cell clones (SCCs), as well as the antigen profiles of the major cell subpopulations described in this paper.

(B) Phase contrast micrographs (20×) of HME and HME-flopc populations in 2D culture. Immuno-fluorescence of HME and HME-flopc cells is shown, for E-cadherin (green)b-catenin (red), and  ZO-1 [nuclei stained blue with 4,6-diamidino-2-phenylindole (DAPI)].

(C) Immunoblot with antibodies to cytokeratins 14, 18 and 19, vimentin, E-cadherin and b-catenin
(total and active forms).

(D) Flow cytometry plots for CD44, CD24, and ESA on bulk HME and HME-flopc cells.

Gating is set to unstained control cells.




Fig. S1. (A) Bright phase micrographs (20×) showing morphology of two HME-flopc-CD44lo single-cell clones.

Fig. S1. (A) Bright phase micrographs (20×) showing morphology of two HME-flopc-CD44 lo single-cell clones (SCCs, FL1 and FL2) and two HME-flopc-CD44 hi SCCs (FH1 and FH2). Immunofluorescence (20×) demonstrates that E-cadherin, b-catenin, and ZO-1 rarely localize to cell–cell junctions in HME-flopc SCCs.

(B) Flow cytometry analysis to determine ESA expression in the various cell populations, demonstrating that HME bulk cells contain ESA-positive and -negative cells, whereas bulk HME-flopc cells and SCCs are largely ESA negative.

(C) 3D culture of mammary epithelial cells (HME and HME-flopc) on Matrigel illustrating their epithelial origins. Phase contrast micrographs (20×), hematoxylin staining (40×), and immunofluorescence (40×) are shown for cytokeratin, vimentin, and MUC1.

(D) Gene set enrichment analysis comparing gene expression signatures of pure HME-flopc-CD44 hi cells (SCC FH1) and bulk HME-flopc cells to published gene expression profiles of primary luminal colony-forming cells (CFCs), bipotent CFCs, differentiated luminal cells, and differentiated myoepithelial cells (19).
HME-flopc-CD44 hi cells are enriched for bipotent and luminal CFC gene signatures.

(E) Flow cytometry plots showing CD44/CD24 profile of HME-flopc SCCs.



...

Discussion:

The most un-anticipated discovery that has emerged from this
study is the plasticity that we can now ascribe to human mammary
epithelial cells. We have shown that differentiated mammary
epithelial cells can convert to a stem-like state, doing so in
an apparent stochastic manner in vitro. This conversion occurs
in transformed and non-transformed HMECs isolated from cell
lines and primary tissue. In each case, the conversion proceeded
without genetic manipulation.

These findings represent a profound divergence from the
currently accepted uni-directional hierarchical model of mammary
epithelial cells and have widespread implications for the
use of cultured cells. In mammalian cells, the idea that non-stem
cells de-differentiate to form functional stem cells has been restricted
to the notion that progenitor cells can re-acquire stem
cell activity in mouse differentiating spermatogonia (26). As
such, our work demonstrates in mammalian cells that differentiated
epithelial cells can revert to a stem-like state.

Our findings also hold implications for the development of
anti-cancer therapeutics. As we previously reported, cells that
have been forced experimentally into a mesenchymal / stem-like
state can be used to screen for candidate therapeutic agents that
specifically target CSCs (27); the intent here was to eliminate
these cells and thereby deprive tumors of their ability to regenerate
and thrive following initial therapy. However, if non-CSCs
can spontaneously de-differentiate into CSCs, then targeting
CSC populations will, on its own, be unlikely to yield durable
clinical responses, because the therapeutic eradication of existing
CSC populations might be followed by their regeneration from
non-CSCs within the tumor under treatment.

Given the present findings, the known ability of micro-environmental
signals to provoke epithelial–mesenchymal transitions
(EMTs) and the close connection between passage through an
EMT and entrance into a stem-cell state, we suspect that the
presently observed spontaneous conversion in vitro may be
augmented in vivo by contextual signals in the tumor micro-environment,
such as those that drive the EMT (28, 29). Relevant
here are studies demonstrating that hypoxia-inducible factors
(HIFs) can induce the EMT phenotype and promote metastasis
and the CSC phenotype (30, 31). Spontaneous de-differentiation
in vivo may involve the reactivation of one or more of the described
pluripotency factors (Oct4, Klf4, c-myc, and Sox-2) (32).
Hence, the representation of CSCs within tumor cell populations
is likely to be influenced both by contextual signals and by the
intrinsic phenotypic plasticity of these cells, as observed here.

The ability of non-CSCs to convert into CSCs in vivo might
resolve many of the current inconsistencies of the CSC model. In
particular, the observed plasticity that was once reserved for CSCs
alone can now be associated with non-stem cells. As such, CSC
populations may differ profoundly between various tumor types
according to the inherent plasticity of cells in their respective
nonstem fractions and their ability to spawn CSCs de novo.

The present observations lend further support to the emerging
view that the biological state of cells-of-origin is an important
determinant of the phenotype of their transformed derivatives
(8, 9), where experimental transformation of cells that have a
phenotype related to that of mammary stem cells generates cell
populations with a high frequency of tumor-initiating cells
(~1:1,420–1:1,804 cells) and metastasis, which contrasts with the
low tumor-initiating ability and non-metastatic nature of tumors
derived via transformation of more differentiated cell types.

The present findings hold the implication that patient- and
tissue-specific stem-like cells may one day be created in vitro via
spontaneous conversion of a patient’s own terminally differentiated
epithelial cells, a process that would not require any genetic
alteration of these cells. Such stem-like cells could be important
for regenerative therapies. Our results further emphasize the
pathological implications of cellular plasticity in cancer development,
progression, and recurrence. Further research needs to be
undertaken to determine the mechanism underlying the de novo
generation of CSCs from non-CSCs in vivo, with the promise
of potential novel targets for future cancer therapies aimed at
eradicating CSCs.

Materials and Methods

Detailed materials and methods are provided in SI Materials and Methods.

Cell Culture.

HME cells and all derivatives were cultured in MEGM media as
previously described (13). HMECs were isolated from primary tissue as previously
described (33) and cultured in M87A+X (34). A list of antibodies is
provided in Table S1.

Mammosphere Culture.

Mammosphere culture was performed as previously described (17).

Flow Cytometry.

Cells were prepared according to standard protocols.

Animal Studies.

Athymic female nude mice were 2–4 mo of age at time of
injections. Tumor cells were resuspended in 10% Matrigel/MEGM (20 mL) for
mammary fat pad injections. GFP-positive lung metastases were counted
from individual lobes by fluorescent microscopy.

Statistical Analysis.

Data are presented as mean ± SEM. Student’s t test (two-tailed)
was used to compare two groups (P < 0.05 was considered significant)
unless otherwise indicated.

ACKNOWLEDGMENTS:

We thank the Core Facilities at Whitehead Institute for Biomedical Research at Massachusetts Institute of Technology, Koch Institute for Cancer Research, and Annie Gifford for technical assistance at Whitehead Institute for Biomedical Research.

This work was supported by the National Health and Medical Research Council of Australia (C.L.C.),
National Institutes of Health Grant U54 CA12515, Massachusetts Institute of Technology’s Ludwig Center for Molecular Oncology, the Breast Cancer Research Foundation, the Advanced Medical Research Foundation, and a Department of Defense Breast Cancer Research Program Idea Award. R.A.W. is an American Cancer Society Research Professor and a Daniel K. Ludwig Foundation Cancer Research Professor.

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13. Elenbaas B, et al. (2001) Human breast cancer cells generated by oncogenic
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14. Hahn WC, et al. (2002) Enumeration of the simian virus 40 early region elements
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"Single-cell cloning of colon cancer stem cells reveals a multi-lineage differentiation capacity".

12. Frenster JH, and Hovsepian JA,
     "Functional Embryomas as a Result of Embryonic Gene Re-Expression".




Conclusions from Embryoma Genomics:

1. Each cell retains all of its embryonic genes for a lifetime.

2. Controls for embryonic genes are often absent in adults.

3. Uncontrolled embryonic genes can replicate wildly.

4.  Replicating genes participate in  intra-cellular competition.

5.  The basis for gene competition is selective transcription.

6.  MicroRNAs can reprogram embryomic transcription.

7.  Gene reprogramming can produce normal phenotypes.

8.  Normal phenotypes can by-pass chromosomal lesions.

9.  MicroRNA therapy may need to be permanent.

10. Transplantation of microRNAs could be preferred.

http://www.embryomas.net/




Conclusions from Euchromatin Thermodynamic Pathways.

1. Pathways within cell genomes involve a flow of information.

2. Information can flow by direct contact or by third parties.

3. Direct contact within whole genomes is difficult to regulate.

4. DNA-DNA direct contects are influenced by agents.

5. Nuclear agents include hydrophilic ionic and hydrophobic conforming ligands.

6. Third parties within genomes involve RNAs and proteins.

7.  RNAs and proteins are easy to regulate or reverse.

8.  Information can be shared, lost, or transformed.

9. System information can be hidden during system isolation.

10.  Local information can be permanently lost during system entropy.

http://www.cancerbiophysics.net/




Further Topics in:  Euchromatin,  active DNA, and  RNA  ribo-regulators:

Links to Current Research in Euchromatin:
Links to Euchromatin Activator RNA Reviews:
Links to Euchromatin Activator RNA Research:
Links to Ultrastructural Probes of DNase I-Sensitive Sites:
Links to RNA as a Therapeutic Agent:
Links to Hodgkin Lymphoma Immuno-Pathology:
Links to Activated T-Lymphocyte Immunotherapy:
Links to Medical Systems Biology:
Links to Selective Gene Transcription:
Links to RNA-Induced Epigenetics:
Links to RNA-Induced Embryogenesis:
Links to RNA and Biological Causality:
Links to Reprogramming and Neoplasia:

A Brief History of Activator RNA:

"Ultrastructural Probes of Active DNA Sites, and the RNA Activators of DNA".
(PowerPoint Presentation).


Top of Page - Euchromatin NetworkEuchromatin ResearchResearch in Quantitative Radiology


For Further Information and Feedback:

Jeannette A. Hovsepian, M.D.
E-mail: frensasc@ix.netcom.com
Phone:  +1 650 367 6483




euchromatin: "the most active portion of the genome within the cell nucleus".
embryoma:  "adult neoplasm expressing one or more embryo-exclusive genes".
entropy:  "maximum entropy defines the isolated reaction steady-state equilibrium".
EMT: "activated embryonic gene network driving cancer progression".
enhancers: "long noncoding RNAs capable of activating gene transcription".